BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB003G07LP1|AL425176
(967 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1147 1873 0.0
>3x_Contig1147
Length = 6505
Score = 1873 bits (944), Expect = 0.0
Identities = 964/969 (99%), Gaps = 3/969 (0%)
Strand = Plus / Minus
Query: 1 tcacctagtgtttgttgacaatatctgaattaggaaatacgtaaacatcaaattagagga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5745 tcacctagtgtttgttgacaatatctgaattaggaaatacgtaaacatcaaattagagga 5686
Query: 61 aaaaccaaaaaaaa-cacagaattggcaaaggaaaacgagatcataattacataagtatt 119
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5685 aaaaccaaaaaaaaacacagaattggcaaaggaaaacgagatcataattacataagtatt 5626
Query: 120 cacgtgatttcaaattttcaactagcagtaattccgggtaagtaaattcattctattaat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5625 cacgtgatttcaaattttcaactagcagtaattccgggtaagtaaattcattctattaat 5566
Query: 180 attttattcttttctccagccaccgacctccgcctcatatccgaggaaactcacgtgccg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5565 attttattcttttctccagccaccgacctccgcctcatatccgaggaaactcacgtgccg 5506
Query: 240 agctcttacccggataatcatagttcctgacaattaattacttttccattcgctggcaga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5505 agctcttacccggataatcatagttcctgacaattaattacttttccattcgctggcaga 5446
Query: 300 gataatcaaagaaagggcgtgcaaagacaagtaccaaggaaatataaaccttgagcttca 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5445 gataatcaaagaaagggcgtgcaaagacaagtaccaaggaaatataaaccttgagcttca 5386
Query: 360 atcaccaagcttcttcgcagaggcatacttgcgtattattttcactggctctaattctaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5385 atcaccaagcttcttcgcagaggcatacttgcgtattattttcactggctctaattctaa 5326
Query: 420 atactcagagtgtgattcgaattggatcatttattgtcctggtaaatcatcattttttct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5325 atactcagagtgtgattcgaattggatcatttattgtcctggtaaatcatcattttttct 5266
Query: 480 ctatatacgagaagagctgaagatcaccataataggggcataatgcgcgctaaatttgtg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5265 ctatatacgagaagagctgaagatcaccataataggggcataatgcgcgctaaatttgtg 5206
Query: 540 ctgcgtcgttaatactgaaaagttcctgggttttcaaacatatgtactatatataaaaaa 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5205 ctgcgtcgttaatactgaaaagttcctgggttttcaaacatatgtactatatataaaaaa 5146
Query: 600 aacagtgtactgtggccagtacattagcaatatcctaactgacaggattttctagcttac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5145 aacagtgtactgtggccagtacattagcaatatcctaactgacaggattttctagcttac 5086
Query: 660 tgccttgctgtcattcggcgttcttctatttcctttattttattctgttcggcgttttcc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5085 tgccttgctgtcattcggcgttcttctatttcctttattttattctgttcggcgttttcc 5026
Query: 720 aataatcgagaaaatttcaaaatccgatccccttttcattcatcttccttttattctacc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5025 aataatcgagaaaatttcaaaatccgatccccttttcattcatcttccttttattctacc 4966
Query: 780 tggctatggtagtatatttgttctagtgttttttctaactttgttaatatttcatcattg 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4965 tggctatggtagtatatttgttctagtgttttttctaactttgttaatatttcatcattg 4906
Query: 840 tcatactatattgaaatataaagaaggcatttttaaatattgagagctgatttgatttga 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4905 tcatactatattgaaatataaagaaggcatttttaaatattgagagctgatttgatttga 4846
Query: 900 tttgaaccaatttaaactttagagaagaattgagttgttttgctaaaaaamcc--aaaca 957
|||||||||||||||||||||||||||||||||||||||||||||||||| || || ||
Sbjct: 4845 tttgaaccaatttaaactttagagaagaattgagttgttttgctaaaaaaacccaaacca 4786
Query: 958 gtcactcac 966
|||||||||
Sbjct: 4785 gtcactcac 4777
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 9732
Number of Sequences: 1807
Number of extensions: 9732
Number of successful extensions: 97
Number of sequences better than 1.0e-20: 1
length of query: 967
length of database: 10,358,551
effective HSP length: 16
effective length of query: 951
effective length of database: 10,329,639
effective search space: 9823486689
effective search space used: 9823486689
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)